Analysis of high iron rice lines reveals new miRNAs that target iron transporters in roots Sequencing of small RNA libraries revealed 153 known and 41 novel miRNAs in roots. Among them, 59 known and 14 novel miRNAs were found to be significantly expressed. miR166, miR399, and...
Defence transcriptomes responsive to Pythium aphanidermatum were analyzed in Curcuma longa. 2978 transcripts were differentially expressed in response to P. aphanidermatum infection. DEGs encoding NBS-LRRs, receptor kinases and WRKYs were highly enriched during pathogen attack. ET and JA signaling constitute a synergistic defence response...
P. amarus leaf transcriptome was sequenced using the Illumina Miseq platform. 85,927 non-redundant “uni-transcript” sequences with an average length of 1548 bp, from 18,060,997 raw reads were assembled. Sequence similarity analyses and annotation of these uni-transcripts were performed against databases like green plants non-redundant (nr)...
Complete transcriptome catalogue of brinjal fruit was generated using NGS technology. Brinjal transcripts showed significant similarity with other plant proteins. Putative allergen sequences of eggplant matched with 48 different types of existing allergens. B-cell epitopes were identified using BepiPred linear epitope prediction tool. ...